CATTE, ANDREA
CATTE, ANDREA
DIPARTIMENTO DI FISICA
Tripartite efflux pumps of the RND superfamily: what did we learn from computational studies?
2023-01-01 Athar, Mohd; Gervasoni, Silvia; Catte, Andrea; Basciu, Andrea; Malloci, Giuliano; Ruggerone, Paolo; Vargiu, Attilio Vittorio
Common recognition topology of mex transporters of Pseudomonas aeruginosa revealed by molecular modelling
2022-01-01 Catte, Andrea; K. Ramaswamy, Venkata; Vargiu, Attilio Vittorio; Malloci, Giuliano; Bosin, Andrea; Ruggerone, Paolo
Validation of previous computer models and MD simulations of discoidal HDL by a recent crystal structure of apoA-I.
2012-01-01 Segrest, Jp; Jones, Mk; Catte, Andrea; Thirumuruganandham, Sp
"Sticky" and "Promiscuous", the Yin and Yang of Apolipoprotein A-I Termini in Discoidal High-Density Lipoproteins: A Combined Computational-Experimental Approach
2011-01-01 Jones, Mk; Gu, Ff; Catte, Andrea; Li, L; Segrest, Jp
Assessment of the Validity of the Double Superhelix Model for Reconstituted High Density Lipoproteins A COMBINED COMPUTATIONAL-EXPERIMENTAL APPROACH
2010-01-01 Jones, Mk; Zhang, L; Catte, Andrea; Li, L; Oda, Mn; Ren, G; Segrest, Jp
Role of Lipids in Spheroidal High Density Lipoproteins
2010-01-01 Vuorela, T; Catte, Andrea; Niemela, Ps; Hall, A; Hyvonen, Mt; Marrink, Sj; Karttunen, M; Vattulainen, I.
Structures of Discoidal High Density Lipoproteins A COMBINED COMPUTATIONAL-EXPERIMENTAL APPROACH
2010-01-01 Gu, Ff; Jones, Mk; Chen, Jg; Patterson, Jc; Catte, Andrea; Jerome, Wg; Li, L; Segrest, Jp
Dynamics of Activation of Lecithin: Cholesterol Acyltransferase by Apolipoprotein A-I
2009-01-01 Jones, Mk; Catte, Andrea; Li, L; Segrest, Jp
Thermal Stability of Apolipoprotein A-I in High-Density Lipoproteins by Molecular Dynamics
2009-01-01 Jones, Mk; Catte, Andrea; Patterson, Jc; Gu, Ff; Chen, Jg; Li, L; Segrest, Jp
From Discoidal to Spheroidal HDL particles through Coarse Grained and All Atom Molecular Dynamics Simulations
2008-01-01 Catte, Andrea; Vuorela, T; Niemelä, P; Murtola, T; Segrest, Jp; Marrink, Sj; Karttunen, M; Vattulainen, I.
From Discoidal to Spheroidal HDL particles through All Atom and Coarse Grained Molecular Dynamics simulations
2008-01-01 Catte, Andrea; Vuorela, T; Niemelä, P; Murtola, T; Segrest, Jp; Marrink, Sj; Karttunen, M; Vattulainen, I.
From Discoidal to Spheroidal HDL particles through All Atom and Coarse Grained Molecular Dynamics simulations
2008-01-01 Catte, Andrea; Vuorela, T; Niemelä, P; Murtola, T; Segrest, Jp; Marrink, Sj; Karttunen, M; Vattulainen, I.
Molecular Dynamics Simulated Annealing of Phospholipid- rich HDL
2008-01-01 Segrest, Jp; Jones, Mk; Patterson, Jc; Catte, Andrea
Structure of spheroidal HDL particles revealed by combined atomistic and coarse-grained simulations
2008-01-01 Catte, Andrea; Patterson, Jc; Bashtovyy, D; Jones, Mk; Gu, F; Li, L; Rampioni, A; Sengupta, D; Vuorela, T; Niemela, P; Karttunen, M; Marrink, Sj; Vattulainen, I; Segrest, Jp
Molecular dynamics simulations of monomeric apolipoprotein A-I from a recent X-ray structure
2007-01-01 Bashtovyy, D; Catte, Andrea; Patterson, Jc; Segrest, Jp
Molecular dynamics simulations of normal and Milano rotamers of lipid-bound apolipoprotein A-I particles
2007-01-01 Patterson, Jc; Catte, Andrea; Bashtovyy, D; Segrest, Jp
Preliminary models of spheroidal HDL particles through molecular dynamics
2007-01-01 Catte, Andrea; Patterson, Jc; Bashtovyy, D; Jones, Mk; Gu, F; Li, L; Rampioni, A; Sengupta, D; Niemelä, Ps; Vattulainen, I; Marrink, Sj; Segrest, Jp
Novel changes in discoidal high density lipoprotein morphology: A molecular dynamics study
2006-01-01 Catte, Andrea; Patterson, Jc; Jones, Mk; Jerome, Wg; Bashtovyy, D; Su, Zc; Gu, Ff; Chen, Jg; Aliste, Mp; Harvey, Sc; Li, L; Weinstein, G; Segrest, Jp
Novel Protein-Lipid Conformations of High Density Lipoproteins through Molecular Dynamics
2006-01-01 Catte, Andrea; Patterson, Jc; Bashtovyy, D; Weinstein, G; Su, Z; Li, L; Chen, J; Jones, Mk; Aliste, Mp; Harvey, Sc; Segrest, Jp
Preliminary Models of Spheroidal HDL particles through Molecular Dynamics
2006-01-01 Catte, Andrea; Patterson, Jc; Jones, Mk; Bashtovyy, D; Gu, F; Li, L; Segrest, Jp
| Titolo | Data di pubblicazione | Autore(i) | Rivista | Editore |
|---|---|---|---|---|
| Tripartite efflux pumps of the RND superfamily: what did we learn from computational studies? | 1-gen-2023 | Athar, Mohd; Gervasoni, Silvia; Catte, Andrea; Basciu, Andrea; Malloci, Giuliano; Ruggerone, Paolo; Vargiu, Attilio Vittorio | MICROBIOLOGY | - |
| Common recognition topology of mex transporters of Pseudomonas aeruginosa revealed by molecular modelling | 1-gen-2022 | Catte, Andrea; K. Ramaswamy, Venkata; Vargiu, Attilio Vittorio; Malloci, Giuliano; Bosin, Andrea; Ruggerone, Paolo | FRONTIERS IN PHARMACOLOGY | - |
| Validation of previous computer models and MD simulations of discoidal HDL by a recent crystal structure of apoA-I. | 1-gen-2012 | Segrest, Jp; Jones, Mk; Catte, Andrea; Thirumuruganandham, Sp | JOURNAL OF LIPID RESEARCH | - |
| "Sticky" and "Promiscuous", the Yin and Yang of Apolipoprotein A-I Termini in Discoidal High-Density Lipoproteins: A Combined Computational-Experimental Approach | 1-gen-2011 | Jones, Mk; Gu, Ff; Catte, Andrea; Li, L; Segrest, Jp | BIOCHEMISTRY | - |
| Assessment of the Validity of the Double Superhelix Model for Reconstituted High Density Lipoproteins A COMBINED COMPUTATIONAL-EXPERIMENTAL APPROACH | 1-gen-2010 | Jones, Mk; Zhang, L; Catte, Andrea; Li, L; Oda, Mn; Ren, G; Segrest, Jp | THE JOURNAL OF BIOLOGICAL CHEMISTRY | - |
| Role of Lipids in Spheroidal High Density Lipoproteins | 1-gen-2010 | Vuorela, T; Catte, Andrea; Niemela, Ps; Hall, A; Hyvonen, Mt; Marrink, Sj; Karttunen, M; Vattulainen, I. | PLOS COMPUTATIONAL BIOLOGY | - |
| Structures of Discoidal High Density Lipoproteins A COMBINED COMPUTATIONAL-EXPERIMENTAL APPROACH | 1-gen-2010 | Gu, Ff; Jones, Mk; Chen, Jg; Patterson, Jc; Catte, Andrea; Jerome, Wg; Li, L; Segrest, Jp | THE JOURNAL OF BIOLOGICAL CHEMISTRY | - |
| Dynamics of Activation of Lecithin: Cholesterol Acyltransferase by Apolipoprotein A-I | 1-gen-2009 | Jones, Mk; Catte, Andrea; Li, L; Segrest, Jp | BIOCHEMISTRY | - |
| Thermal Stability of Apolipoprotein A-I in High-Density Lipoproteins by Molecular Dynamics | 1-gen-2009 | Jones, Mk; Catte, Andrea; Patterson, Jc; Gu, Ff; Chen, Jg; Li, L; Segrest, Jp | BIOPHYSICAL JOURNAL | - |
| From Discoidal to Spheroidal HDL particles through Coarse Grained and All Atom Molecular Dynamics Simulations | 1-gen-2008 | Catte, Andrea; Vuorela, T; Niemelä, P; Murtola, T; Segrest, Jp; Marrink, Sj; Karttunen, M; Vattulainen, I. | - | - |
| From Discoidal to Spheroidal HDL particles through All Atom and Coarse Grained Molecular Dynamics simulations | 1-gen-2008 | Catte, Andrea; Vuorela, T; Niemelä, P; Murtola, T; Segrest, Jp; Marrink, Sj; Karttunen, M; Vattulainen, I. | - | - |
| From Discoidal to Spheroidal HDL particles through All Atom and Coarse Grained Molecular Dynamics simulations | 1-gen-2008 | Catte, Andrea; Vuorela, T; Niemelä, P; Murtola, T; Segrest, Jp; Marrink, Sj; Karttunen, M; Vattulainen, I. | - | - |
| Molecular Dynamics Simulated Annealing of Phospholipid- rich HDL | 1-gen-2008 | Segrest, Jp; Jones, Mk; Patterson, Jc; Catte, Andrea | - | - |
| Structure of spheroidal HDL particles revealed by combined atomistic and coarse-grained simulations | 1-gen-2008 | Catte, Andrea; Patterson, Jc; Bashtovyy, D; Jones, Mk; Gu, F; Li, L; Rampioni, A; Sengupta, D; Vuorela, T; Niemela, P; Karttunen, M; Marrink, Sj; Vattulainen, I; Segrest, Jp | BIOPHYSICAL JOURNAL | - |
| Molecular dynamics simulations of monomeric apolipoprotein A-I from a recent X-ray structure | 1-gen-2007 | Bashtovyy, D; Catte, Andrea; Patterson, Jc; Segrest, Jp | BIOPHYSICAL JOURNAL | - |
| Molecular dynamics simulations of normal and Milano rotamers of lipid-bound apolipoprotein A-I particles | 1-gen-2007 | Patterson, Jc; Catte, Andrea; Bashtovyy, D; Segrest, Jp | BIOPHYSICAL JOURNAL | - |
| Preliminary models of spheroidal HDL particles through molecular dynamics | 1-gen-2007 | Catte, Andrea; Patterson, Jc; Bashtovyy, D; Jones, Mk; Gu, F; Li, L; Rampioni, A; Sengupta, D; Niemelä, Ps; Vattulainen, I; Marrink, Sj; Segrest, Jp | BIOPHYSICAL JOURNAL | - |
| Novel changes in discoidal high density lipoprotein morphology: A molecular dynamics study | 1-gen-2006 | Catte, Andrea; Patterson, Jc; Jones, Mk; Jerome, Wg; Bashtovyy, D; Su, Zc; Gu, Ff; Chen, Jg; Aliste, Mp; Harvey, Sc; Li, L; Weinstein, G; Segrest, Jp | BIOPHYSICAL JOURNAL | - |
| Novel Protein-Lipid Conformations of High Density Lipoproteins through Molecular Dynamics | 1-gen-2006 | Catte, Andrea; Patterson, Jc; Bashtovyy, D; Weinstein, G; Su, Z; Li, L; Chen, J; Jones, Mk; Aliste, Mp; Harvey, Sc; Segrest, Jp | - | - |
| Preliminary Models of Spheroidal HDL particles through Molecular Dynamics | 1-gen-2006 | Catte, Andrea; Patterson, Jc; Jones, Mk; Bashtovyy, D; Gu, F; Li, L; Segrest, Jp | - | - |